Small Molecule Preventing and Reversing TDP-43 Protein Aggregation as Therapeutic for Amyotrophic Lateral Sclerosis

Overview

Neurodegenerative diseases such as ALS, Alzheimer’s, and Parkinson’s affect more than 50 million people worldwide, robbing individuals of independence and placing a profound emotional and financial strain on families and healthcare systems. Despite decades of research, there are still no effective treatments that stop or reverse disease progression.

In ALS specifically, patients typically survive only two to five years after diagnosis, and current approved drugs only offer minimal benefit with about 6 months life extension. As such, there is an urgent need for new therapies that target the root cause of these diseases rather than just their symptoms.

Neuropeutics is addressing this unmet need by developing JRMS, a first-in-class small molecule that directly targets TDP-43 protein clumping, which is a key disease driver common across the wide range of neurodegenerative diseases. In 97% of ALS cases, toxic clumping of TDP-43 disrupts normal cell function and leads to neuron death. JRMS acts through a unique mechanism to prevent and reverse TDP-43 clumping, and that restores its normal localization, effectively addressing the root pathology rather than downstream effects.

Early studies in human cells and animal models have shown that JRMS reduces toxic TDP-43 protein clumps buildup and reverses clumps already formed at the time of treatment, offering strong proof of concept for disease modification. The program is now advancing through medicinal chemistry optimization and preclinical validation to select a lead development candidate for future clinical testing. This work is being advanced through a collaborative partnership between the Robertson Lab at the University of Toronto, Neuropeutics Inc, Toronto Innovation Acceleration Partners (TIAP) and AbbVie.

LifeArc contributes world-class medicinal chemistry and drug development expertise through Neuropeutics. AbbVie provides strategic guidance on industry insights and CMC development. Together, they are developing JRMS as therapeutic to extend patients’ lives and improve their quality of life, while also reducing the significant socioeconomic burden of ALS in Canada and worldwide.

Genomics-Driven Upcycling of Food Waste to Medium-Chain Fatty Acids Using Engineered Anaerobic Consortia

Overview

This project will advance a novel anaerobic fermentation technology for upcycling food waste into high-value specialty chemicals called medium-chain fatty acids (MCFAs). MCFAs are carboxylic acids of 6 to 12 carbon atoms with diverse applications in animal feed, industrial chemicals, food and pharmaceuticals.

Current MCFA supply is heavily dependent on coconut and palm kernel oil, creating major vulnerabilities to the chemicals industry: reputational risks due to deforestation, greenhouse gas emissions, high and volatile pricing, and supply chain disruptions. Production is geographically concentrated in Southeast Asia, and regulatory pressure is mounting to reduce the environmental impact of palm oil. These factors create a clear market pull for secure, domestic, low-carbon MCFA production.

Bioproduction of MCFAs from food waste has significant shortcomings. Existing open-culture microbiomes primarily generate C6-C8 MCFAs, show poor selectivity for MCFAs over short-chain fatty acids, and suffer from low yields due to competing processes like methanogenesis. SymBL overcomes these gaps by developing engineered microbiomes from the bottom up. Using defined combinations of bacteria and metabolic engineering, these engineered microbiomes can redirect carbon and energy from food waste toward MCFAs with far greater control, yield, and selectivity compared to conventional open-culture fermentations.

SymBL constructs microbiomes from large in-house culture collections, leveraging automation tools, machine learning, and genetic engineering to assemble and test thousands of microbiomes towards optimal MCFA production. A microbiome with enhanced C6-C8 production from source-separated organic waste (SSO) has already been designed and benchmarked.

The proposed project will support the next development phase: expanding MCFA production up to C12. They have identified the enzyme that restricts MCFA production to C8. The project will deploy novel genetic tools to modify this enzyme in key bacteria, enabling production of C6 to C12 MCFAs via anaerobic fermentation for the first time. These enhanced strains will be integrated into optimized microbiomes, and performance will be validated using SSO in a 20-L continuous bioreactor system.

By achieving first-to-market C6-C12 MCFA bioproduction from food waste, this project significantly expands the market potential for waste-to-MCFA upcycling, while displacing palm-derived chemicals and reducing the economic.

Synthetic Reference Epigenomics: Building a Secure Cloud Framework for Scalable Rare Disease Diagnostics

Overview

Globally, 446 million people are affected by a rare genetic disorder (RGD). Standard-of-care genetic tests cannot deliver a diagnosis for 70% of these patients, limiting their access to specialized care and burdening healthcare systems.

Over the past decade, the EpiSign™ Research Program at LHSCRI has led the clinical application of DNA methylation patterns, called episignatures, establishing EpiSign™ as the world’s first and only clinically validated whole-genome epigenetic diagnostic test. The technology is deployed globally to diagnose unresolved RGDs and add functional context to variants of unknown significance.

EpiSign™ is entering the next stage of innovation with the release of EpiSign™ v6 to expand scope and capability in rare diseases. V6 will cover over 200 RGDs and nearly 500 canonical/non-canonical episignatures, including improved detection of mosaic, hypomorphic, and inverse patterns. These capabilities will strengthen diagnostic sensitivity, specificity, and interpretive power across the rare disease spectrum.

Complementing this, development is happening on EpiSign™ METRIC, a cloud-enabled analysis environment for processing DNA methylation microarray data with high throughput and accuracy. However, as 5-base sequencing technologies become integrated into routine clinical practice, there is a critical need for EpiSign™ to evolve beyond array-based data and peripheral blood.

This project will develop a synthetic reference framework that generates and validates high-fidelity methylation reference datasets across sequencing platforms and tissue sources. By creating privacy-preserving synthetic references, robust AI classifiers can be trained that maintain clinical performance without requiring the transfer or exposure of patient data. Deploying these new algorithms within a secure, distributed cloud infrastructure will enable scalable, privacy-preserving EpiSign™ testing within laboratories worldwide.

The outcome will be a unified, platform-agnostic epigenomic analysis system capable of integrating both sequence and methylation information, broadening EpiSign™’s clinical utility to hereditary and environmentally influenced conditions. This will lay the foundation for future applications in exposure-related and prenatal diagnostics, and position EpiSign™ as the cornerstone of next-generation clinical epigenomics-offering secure, cross-platform, and scalable diagnostic solutions that address one of medicine’s most persistent unmet needs.

Regional Genomic Applications Partnership Program (GAPP)

Regional Genomic Applications Partnership Program (GAPP)

Ontario Genomics’ Regional GAPP:
Fuelling Ontario’s Next Generation of Biotech Spinouts

Ontario Genomics is launching our Regional Genomic Applications Partnership Program (GAPP) to accelerate the commercialization of academic discoveries into made-in-Ontario biotech solutions.

Ontario is home to world-class researchers and institutions producing groundbreaking discoveries, yet many of them fail to progress beyond the lab. That’s because spinout companies (formed to commercialize academic intellectual property) that bring these innovations to market are often stifled by insufficient access to capital, long commercialization timelines and limited business expertise.

Ontario Genomics’ Regional GAPP is addressing these challenges by supporting spinouts at this critical lab-to-company technology transfer stage, facilitating R&D capacity, independence from academia and positioning them for seed financing. The end results will fuel job creation, company retention, IP generation and attract foreign investment, while reinforcing Ontario’s economic resilience and global reputation in genomics innovation.

In support of the Canadian Genomics Strategy, and as part of their broader GAPP initiative, Genome Canada has provided $4 million over four years to the Ontario Genomics Regional GAPP. The Ontario Ministry of Colleges, Universities, Research Excellence and Security (MCURES) has committed to match the Genome Canada contribution through the Ontario Research Fund (ORF) for the 2025 round, pending Ministry’s approval of projects.

Program Objectives:

  • Accelerate/facilitate translation of products, platforms or IP from an academic lab into a company in support of commercialization, company benefits, Ontario’s economy and made-in-Ontario IP.
  • Position early-stage Ontario companies to raise follow-on funding at project end.
  • Develop business acumen in post-graduate trainees to build a pool of highly qualified personnel (HQP) to lead the next wave of biotech companies in Ontario.
  • Position Ontario as a hub for the creation, growth and scaling of biotech innovation.

Eligibility Criteria:

  • The genomics-based/enabled project supports the invention, development or commercialization of a biotech innovation with a clearly articulated market opportunity.
  • The project is driven by a spinout company in partnership with an Ontario-based researcher and will facilitate translation of IP from academia into the commercialization pathway.
  • The spinout company is incorporated, Canadian-owned, and based in Ontario.
  • The spinout company stage is pre-seed or earlier.
  • The spinout company has at least two employees (including executives). If the lead project researcher is also the CEO, the company’s governance board must have at least one additional member.
  • The project has the potential to generate social and economic benefits for the company and Ontario.

If you meet the above criteria, please fill out this intake form.

Funding and Term:

  • The project term is 1-2 years (no extensions).
  • Four projects will be funded per year.
  • Project budget will be a minimum of $667,734:
    • $222,578 from Genome Canada
    • $222,578 from MCURES/ORF (conditions apply – see Program Guide for details)
    • ≥$222,578 from the private sector (cash or in-kind)